泛球生物网-技术分类 - 前沿生物技术


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蛋白质数据库及序列分析

01. 氨基酸基本信息（amino acid information)

amino acid structures

genetic code table

PROWL - Amino Acid Properties

Physical-chemical AA classification (Venn diagram)

Amino acid properties (Venn diagram)

Reverse Translation (all possibilities) (Colorado, US)

ExPASy - RandSeq tool

　

02. 蛋白质数据库（protein database)

DDBJ (DNA Data Bank of Japan)

　

03. 序列查询工具（sequence retrieval)

SRS at EMBL-EBI, Hinxton (UK)

DBGET (GenomeNet, Japan)

　

04. 模体及模式识别（Motifs and patterns searching)

SMART - Simple Modular Architecture Research Tool

Motif Scan (ISREC)

Radar Repeats in proteins

MOTIF Searching Protein and Nucleic Acid Sequence Motifs

PatScan at Argonne (US)

PRATT at EBI (input alignment) ___

PROSITE at ExPASy (Switzerland)

Protein Motifs at ALCES (US)

PROTCOMP (SoftBerry)

05. 跨膜蛋白（transmembrane protein)

TMpred Server (EMBnet)

TOPO2 Transmembrane Protein Display

06. 疏水性图谱（hydrophobicity plot)

Hydropathicity Plots at Colorado (US)

Antigenicity Plot

drawhca Hydrophobic Cluster Analysis plot

发表时间：2008-10-28

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